1 package com.github.celldynamics.quimp.omero;
2
3 import java.awt.BorderLayout;
4 import java.awt.Color;
5 import java.awt.Component;
6 import java.awt.Container;
7 import java.awt.FlowLayout;
8 import java.awt.GridBagConstraints;
9 import java.awt.GridBagLayout;
10 import java.awt.GridLayout;
11 import java.awt.Insets;
12 import java.awt.Window;
13 import java.awt.event.ActionEvent;
14 import java.awt.event.ActionListener;
15 import java.awt.event.FocusAdapter;
16 import java.awt.event.FocusEvent;
17 import java.awt.event.WindowAdapter;
18 import java.awt.event.WindowEvent;
19 import java.text.SimpleDateFormat;
20 import java.util.ArrayList;
21 import java.util.List;
22
23 import javax.swing.AbstractAction;
24 import javax.swing.Action;
25 import javax.swing.BoxLayout;
26 import javax.swing.DefaultListModel;
27 import javax.swing.JButton;
28 import javax.swing.JCheckBox;
29 import javax.swing.JDialog;
30 import javax.swing.JEditorPane;
31 import javax.swing.JLabel;
32 import javax.swing.JList;
33 import javax.swing.JPanel;
34 import javax.swing.JPasswordField;
35 import javax.swing.JScrollPane;
36 import javax.swing.JSplitPane;
37 import javax.swing.JTabbedPane;
38 import javax.swing.JTable;
39 import javax.swing.JTextField;
40 import javax.swing.JTextPane;
41 import javax.swing.ListSelectionModel;
42 import javax.swing.SwingConstants;
43 import javax.swing.border.EmptyBorder;
44 import javax.swing.event.ChangeEvent;
45 import javax.swing.event.ChangeListener;
46 import javax.swing.event.ListSelectionEvent;
47 import javax.swing.event.ListSelectionListener;
48 import javax.swing.table.AbstractTableModel;
49
50 import org.slf4j.Logger;
51 import org.slf4j.LoggerFactory;
52
53 import ij.io.DirectoryChooser;
54 import omero.gateway.model.DatasetData;
55 import omero.gateway.model.ImageData;
56
57
58
59
60
61
62
63 @SuppressWarnings("serial")
64 public class OmeroLoginDialog extends JDialog {
65 static final Logger LOGGER = LoggerFactory.getLogger(OmeroLoginDialog.class.getName());
66
67 private static final String DISCONNECTED = "<b>Disconnected</b>";
68 private static final String CONNECTED = "<b>Connected</b>";
69
70 private final JPanel contentPanel = new JPanel();
71 private final ImageTableeroLoginDialog.html#ImageTable">ImageTable imageTableModel = new ImageTable();
72 private JTextField tfHost;
73 private JTextField tfUser;
74 private JPasswordField tfPass;
75 private final Action testAction = new ConnectAction();
76 private OmeroClient_ omc;
77 private final Action downloadAction = new DownloadAction();
78 private final Action uploadAction = new UploadAction();
79 private JTabbedPane tabbedPane;
80 private JPanel panelDownload;
81 private JPanel panelUpload;
82 private final Action storeAction = new StoreAction();
83 private JTextField tfPort;
84 private JCheckBox chckbxStoreCred;
85 private JTextPane tpInfo;
86 private JPanel panelSetup;
87 private JList<String> listDatasetsDownload;
88 private JTable tableImagesDownload;
89 private JTable tableImagesUpload;
90 private JList<String> listDatasetsUpload;
91 private final Action uploadExperimentAction = new UploadExperimentAction();
92 private final Action downloadExperimentAction = new DownloadExperimentAction();
93
94
95
96
97
98
99
100 private enum Fields {
101 HOST, USER, PASS, PORT
102 }
103
104
105
106
107
108
109
110 private void readTextField(Object obj, Fields name) {
111 LOGGER.debug("Reading: " + name);
112 if (obj instanceof JTextField) {
113 String text = ((JTextField) obj).getText();
114 switch (name) {
115 case HOST:
116 omc.setHost(text);
117 break;
118 case USER:
119 omc.setUser(text);
120 break;
121 case PASS:
122 omc.setPass(text);
123 break;
124 case PORT:
125 omc.setPort(text);
126 break;
127 default:
128 throw new IllegalArgumentException("Wrong input type.");
129 }
130 } else {
131 throw new IllegalArgumentException("Wrong input type.");
132 }
133
134 }
135
136
137
138
139
140
141 public OmeroLoginDialog() {
142 super((Window) null);
143 }
144
145
146
147
148
149
150 public OmeroLoginDialog(OmeroClient_ omc) {
151 this();
152 addWindowListener(new WindowAdapter() {
153 @Override
154 public void windowClosing(WindowEvent arg0) {
155 omc.disconnect();
156 }
157 });
158 this.omc = omc;
159 setTitle("Omero login");
160 setDefaultCloseOperation(JDialog.DISPOSE_ON_CLOSE);
161 setBounds(100, 100, 789, 594);
162 getContentPane().setLayout(new BorderLayout());
163 contentPanel.setBorder(new EmptyBorder(5, 5, 5, 5));
164 getContentPane().add(contentPanel, BorderLayout.CENTER);
165 contentPanel.setLayout(new BoxLayout(contentPanel, BoxLayout.X_AXIS));
166 {
167 tabbedPane = new JTabbedPane(JTabbedPane.TOP);
168 tabbedPane.addChangeListener(new ChangeListener() {
169 public void stateChanged(ChangeEvent e) {
170 if (e.getSource() instanceof JTabbedPane) {
171 JTabbedPane pane = (JTabbedPane) e.getSource();
172 if (pane.getSelectedComponent() == getPanelDownload()) {
173 LOGGER.trace("Selected download pane");
174
175 }
176 if (pane.getSelectedComponent() == getPanelUpload()) {
177 LOGGER.trace("Selected upload pane");
178
179 }
180 if (pane.getSelectedComponent() == getPanelSetup()) {
181 LOGGER.trace("Selected setup pane");
182 }
183 }
184 }
185 });
186 contentPanel.add(tabbedPane);
187 {
188 panelSetup = new JPanel();
189 panelSetup.setBorder(new EmptyBorder(4, 4, 4, 4));
190 tabbedPane.addTab("Setup", null, panelSetup, "Setup connection");
191 tabbedPane.setEnabledAt(0, true);
192 GridBagLayout gbl_panelSetup = new GridBagLayout();
193 gbl_panelSetup.columnWidths = new int[] { 417 };
194 gbl_panelSetup.rowHeights = new int[] { 26, 26, 26, 26, 26, 26, 26 };
195 gbl_panelSetup.columnWeights = new double[] { 1.0 };
196 gbl_panelSetup.rowWeights = new double[] { 0.0, 0.0, 0.0, 0.0, 0.0, 1.0, 0.0 };
197 panelSetup.setLayout(gbl_panelSetup);
198 {
199 JPanel panel_1 = new JPanel();
200 GridBagConstraints gbc_panel_1 = new GridBagConstraints();
201 gbc_panel_1.fill = GridBagConstraints.BOTH;
202 gbc_panel_1.insets = new Insets(0, 0, 5, 0);
203 gbc_panel_1.gridx = 0;
204 gbc_panel_1.gridy = 0;
205 panelSetup.add(panel_1, gbc_panel_1);
206 panel_1.setLayout(new GridLayout(0, 2, 0, 0));
207 {
208 JLabel lblNewLabel = new JLabel("Host address");
209 panel_1.add(lblNewLabel);
210 }
211 {
212 tfHost = new JTextField();
213 tfHost.setText(omc.getHost());
214 tfHost.setHorizontalAlignment(SwingConstants.RIGHT);
215 tfHost.addFocusListener(new FocusAdapter() {
216 @Override
217 public void focusLost(FocusEvent arg0) {
218 readTextField(arg0.getSource(), Fields.HOST);
219 }
220 });
221 tfHost.addActionListener(new ActionListener() {
222 public void actionPerformed(ActionEvent arg0) {
223 readTextField(arg0.getSource(), Fields.HOST);
224 }
225 });
226 tfHost.setToolTipText("Host name");
227 panel_1.add(tfHost);
228 tfHost.setColumns(10);
229 }
230 }
231 {
232 JPanel panel_1 = new JPanel();
233 GridBagConstraints gbc_panel_1 = new GridBagConstraints();
234 gbc_panel_1.fill = GridBagConstraints.BOTH;
235 gbc_panel_1.insets = new Insets(0, 0, 5, 0);
236 gbc_panel_1.gridx = 0;
237 gbc_panel_1.gridy = 1;
238 panelSetup.add(panel_1, gbc_panel_1);
239 panel_1.setLayout(new GridLayout(0, 2, 0, 0));
240 {
241 JLabel lblNewLabel_1 = new JLabel("User name");
242 panel_1.add(lblNewLabel_1);
243 }
244 {
245 tfUser = new JTextField();
246 tfUser.setText(omc.getUser());
247 tfUser.setHorizontalAlignment(SwingConstants.RIGHT);
248 tfUser.addFocusListener(new FocusAdapter() {
249 @Override
250 public void focusLost(FocusEvent e) {
251 readTextField(e.getSource(), Fields.USER);
252 }
253 });
254 tfUser.addActionListener(new ActionListener() {
255 public void actionPerformed(ActionEvent arg0) {
256 readTextField(arg0.getSource(), Fields.USER);
257 }
258 });
259 tfUser.setToolTipText("User name");
260 panel_1.add(tfUser);
261 tfUser.setColumns(10);
262 }
263 }
264 {
265 JPanel panel_1 = new JPanel();
266 GridBagConstraints gbc_panel_1 = new GridBagConstraints();
267 gbc_panel_1.fill = GridBagConstraints.BOTH;
268 gbc_panel_1.insets = new Insets(0, 0, 5, 0);
269 gbc_panel_1.gridx = 0;
270 gbc_panel_1.gridy = 2;
271 panelSetup.add(panel_1, gbc_panel_1);
272 panel_1.setLayout(new GridLayout(0, 2, 0, 0));
273 {
274 JLabel lblNewLabel_2 = new JLabel("Password");
275 panel_1.add(lblNewLabel_2);
276 }
277 {
278 tfPass = new JPasswordField();
279 tfPass.setHorizontalAlignment(SwingConstants.RIGHT);
280 tfPass.addFocusListener(new FocusAdapter() {
281 @Override
282 public void focusLost(FocusEvent e) {
283 readTextField(e.getSource(), Fields.PASS);
284 }
285 });
286 tfPass.addActionListener(new ActionListener() {
287 public void actionPerformed(ActionEvent e) {
288 readTextField(e.getSource(), Fields.PASS);
289 }
290 });
291 tfPass.setToolTipText("Password");
292 tfPass.setText(omc.getPass());
293 panel_1.add(tfPass);
294 tfPass.setColumns(10);
295 }
296 }
297 {
298 JPanel panel = new JPanel();
299 GridBagConstraints gbc_panel = new GridBagConstraints();
300 gbc_panel.insets = new Insets(0, 0, 5, 0);
301 gbc_panel.fill = GridBagConstraints.BOTH;
302 gbc_panel.gridx = 0;
303 gbc_panel.gridy = 3;
304 panelSetup.add(panel, gbc_panel);
305 panel.setLayout(new GridLayout(0, 2, 0, 0));
306 {
307 JLabel lblNewLabel_3 = new JLabel("Port");
308 panel.add(lblNewLabel_3);
309 }
310 {
311 tfPort = new JTextField();
312 tfPort.setText(omc.getPort());
313 tfPort.setToolTipText("Port number");
314 tfPort.setHorizontalAlignment(SwingConstants.RIGHT);
315 tfPort.addFocusListener(new FocusAdapter() {
316 @Override
317 public void focusLost(FocusEvent e) {
318 readTextField(e.getSource(), Fields.PORT);
319 }
320 });
321 tfPort.addActionListener(new ActionListener() {
322 public void actionPerformed(ActionEvent e) {
323 readTextField(e.getSource(), Fields.PORT);
324 }
325 });
326 panel.add(tfPort);
327 tfPort.setColumns(10);
328 }
329 }
330 {
331 JPanel panel_1 = new JPanel();
332 GridBagConstraints gbc_panel_1 = new GridBagConstraints();
333 gbc_panel_1.fill = GridBagConstraints.BOTH;
334 gbc_panel_1.insets = new Insets(0, 0, 5, 0);
335 gbc_panel_1.gridx = 0;
336 gbc_panel_1.gridy = 4;
337 panelSetup.add(panel_1, gbc_panel_1);
338 panel_1.setLayout(new GridLayout(0, 1, 0, 0));
339 {
340 chckbxStoreCred = new JCheckBox("Store credentials");
341 chckbxStoreCred.setSelected(true);
342 chckbxStoreCred.setAction(storeAction);
343 chckbxStoreCred.setToolTipText(
344 "Store login details in ImageJ preference file. Password will be obfuscated.");
345 panel_1.add(chckbxStoreCred);
346 }
347 }
348 {
349 JScrollPane scrollPane = new JScrollPane();
350 GridBagConstraints gbc_scrollPane = new GridBagConstraints();
351 gbc_scrollPane.fill = GridBagConstraints.BOTH;
352 gbc_scrollPane.insets = new Insets(0, 0, 5, 0);
353 gbc_scrollPane.gridx = 0;
354 gbc_scrollPane.gridy = 5;
355 panelSetup.add(scrollPane, gbc_scrollPane);
356 {
357 JEditorPane tpHelp = new JEditorPane();
358 scrollPane.setViewportView(tpHelp);
359 tpHelp.setContentType("text/html");
360 tpHelp.setText(
361 "<h2>About</h2>\r\n<p>\r\n\tThis simple tool allows for uploading and downloading QuimP datafiles to/from Omero. \r\n\t<ol>\r\n\t\t<li>After filling credential click <i>Connect</i> to establish connection with Omero. Datasets available for logged user will be displayed in <i>Download</i> and <i>Upload</i> tabs.</li>\r\n\t\t<li>To disconnect click <i>Cancel</i></li>\r\n\t\t<li>Select <i>Store credentials</i> to save your password, user, host and port in ImageJ preference file.</li>\r\n\t</ol>\r\n</p>\r\n<h2>Upload</h2>\r\n<p>\r\n\tYou have to select <i>QCONF</i> file that will be uploaded to dataset selected in <i>Upload</i> tab. Corresponding image is read from <i>QCONF</i> (note that due to compatibility reasons <i>QCONF</i> stores full path to the image and if image is not found you will have to locate it manually). Both image and <i>QCONF</i> are uploaded to the Omero. <i>QCONF</i> is attached to the image.\r\n</p>\r\n<h2>Download</h2>\r\n<p>\r\n\tThe image selected in <i>Download</i> will be downloaded to selected folder together with attached <i>QCONF</i>.\r\n</p>");
362 tpHelp.setEditable(false);
363 tpHelp.setCaretPosition(0);
364 }
365 }
366 {
367 JPanel buttonPane = new JPanel();
368 FlowLayout flowLayout = (FlowLayout) buttonPane.getLayout();
369 flowLayout.setAlignment(FlowLayout.RIGHT);
370 GridBagConstraints gbc_buttonPane = new GridBagConstraints();
371 gbc_buttonPane.fill = GridBagConstraints.BOTH;
372 gbc_buttonPane.gridx = 0;
373 gbc_buttonPane.gridy = 6;
374 panelSetup.add(buttonPane, gbc_buttonPane);
375 {
376 JButton btnDownload = new JButton("Download");
377 buttonPane.add(btnDownload);
378 btnDownload.setToolTipText("Download experiment to local folder");
379 btnDownload.setAction(downloadAction);
380 }
381 {
382 JButton btnUpload = new JButton("Upload");
383 buttonPane.add(btnUpload);
384 btnUpload.setToolTipText("Upload experiment to Omero");
385 btnUpload.setAction(uploadAction);
386 }
387 {
388 JButton btnNewButton = new JButton("Test");
389 buttonPane.add(btnNewButton);
390 btnNewButton.setToolTipText("Test connection");
391 btnNewButton.setAction(testAction);
392 }
393 }
394 }
395 {
396 panelDownload = new JPanel();
397 tabbedPane.addTab("Download", null, panelDownload, "Download experiment settings");
398 panelDownload.setLayout(new BorderLayout(2, 2));
399 {
400 JButton btnDownloadExp = new JButton("");
401 btnDownloadExp.setAction(downloadExperimentAction);
402 btnDownloadExp.setToolTipText("");
403 panelDownload.add(btnDownloadExp, BorderLayout.SOUTH);
404 }
405 {
406 JPanel panel = new JPanel();
407 panelDownload.add(panel, BorderLayout.CENTER);
408 panel.setLayout(new GridLayout(1, 2, 0, 2));
409 {
410 JSplitPane splitPane = new JSplitPane();
411 panel.add(splitPane);
412 splitPane.setContinuousLayout(true);
413 splitPane.setResizeWeight(0.5);
414 splitPane.setOneTouchExpandable(true);
415 {
416 listDatasetsDownload = new JList<String>();
417 listDatasetsDownload.addListSelectionListener(new ListSelectionListener() {
418 public void valueChanged(ListSelectionEvent e) {
419 if (!e.getValueIsAdjusting()) {
420 int index = listDatasetsDownload.getSelectedIndex();
421 if (index >= 0) {
422 String name = listDatasetsDownload.getModel().getElementAt(index);
423 LOGGER.trace("Selected: " + name);
424 omc.setCurrentDs(index);
425 imageTableModel.update(omc.getImages(index));
426 }
427 }
428 }
429 });
430 listDatasetsDownload.setSelectionMode(ListSelectionModel.SINGLE_SELECTION);
431 JScrollPane scrollPane = new JScrollPane(listDatasetsDownload);
432 splitPane.setLeftComponent(scrollPane);
433 }
434 {
435 tableImagesDownload = new JTable(imageTableModel);
436 tableImagesDownload.setSelectionMode(ListSelectionModel.SINGLE_SELECTION);
437 tableImagesDownload.getSelectionModel()
438 .addListSelectionListener(new ListSelectionListener() {
439
440 @Override
441 public void valueChanged(ListSelectionEvent e) {
442 if (!e.getValueIsAdjusting()) {
443 int index = tableImagesDownload.getSelectedRow();
444 if (index >= 0) {
445 String name = tableImagesDownload.getValueAt(index, 0).toString();
446 LOGGER.trace("Selected: " + name);
447 omc.setCurrentIm(index);
448 }
449 }
450
451 }
452 });
453 JScrollPane scrollPane = new JScrollPane(tableImagesDownload);
454 splitPane.setRightComponent(scrollPane);
455 }
456 }
457 }
458 tabbedPane.setEnabledAt(1, true);
459 }
460 {
461 panelUpload = new JPanel();
462 tabbedPane.addTab("Upload", null, panelUpload, "Upload experiment settings");
463 panelUpload.setLayout(new BorderLayout(0, 0));
464 {
465 JButton btnUploadExp = new JButton("");
466 btnUploadExp.setAction(uploadExperimentAction);
467 btnUploadExp.setToolTipText("");
468 panelUpload.add(btnUploadExp, BorderLayout.SOUTH);
469 }
470 {
471 JPanel panel = new JPanel();
472 panelUpload.add(panel, BorderLayout.CENTER);
473 panel.setLayout(new GridLayout(1, 0, 0, 0));
474 {
475 JSplitPane splitPane = new JSplitPane();
476 splitPane.setResizeWeight(0.5);
477 splitPane.setOneTouchExpandable(true);
478 splitPane.setContinuousLayout(true);
479 panel.add(splitPane);
480 {
481 JScrollPane scrollPane = new JScrollPane();
482 splitPane.setLeftComponent(scrollPane);
483 {
484 listDatasetsUpload = new JList<String>();
485 listDatasetsUpload.addListSelectionListener(new ListSelectionListener() {
486 public void valueChanged(ListSelectionEvent e) {
487 if (!e.getValueIsAdjusting()) {
488 int index = listDatasetsUpload.getSelectedIndex();
489 if (index >= 0) {
490 String name = listDatasetsUpload.getModel().getElementAt(index);
491 LOGGER.trace("Selected: " + name);
492 omc.setCurrentDs(index);
493 imageTableModel.update(omc.getImages(index));
494 }
495 }
496 }
497 });
498 listDatasetsUpload.setSelectionMode(ListSelectionModel.SINGLE_SELECTION);
499 scrollPane.setViewportView(listDatasetsUpload);
500 }
501 }
502 {
503 JScrollPane scrollPane = new JScrollPane();
504 splitPane.setRightComponent(scrollPane);
505 {
506 tableImagesUpload = new JTable(imageTableModel);
507 tableImagesUpload.setRowSelectionAllowed(false);
508 scrollPane.setViewportView(tableImagesUpload);
509 }
510 }
511 }
512 }
513 tabbedPane.setEnabledAt(2, true);
514 }
515 }
516 {
517 JPanel buttonPane = new JPanel();
518 buttonPane.setBorder(new EmptyBorder(0, 4, 4, 4));
519 getContentPane().add(buttonPane, BorderLayout.SOUTH);
520 {
521 GridBagLayout gbl_buttonPane = new GridBagLayout();
522 gbl_buttonPane.columnWidths = new int[] { 210, 110 };
523 gbl_buttonPane.rowHeights = new int[] { 25 };
524 gbl_buttonPane.columnWeights = new double[] { 1.0, 0.0, 0.0 };
525 gbl_buttonPane.rowWeights = new double[] { 1.0 };
526 buttonPane.setLayout(gbl_buttonPane);
527 {
528 tpInfo = new JTextPane();
529 tpInfo.setContentType("text/html");
530 tpInfo.setText(DISCONNECTED);
531 tpInfo.setBackground(Color.ORANGE);
532 tpInfo.setEditable(false);
533 GridBagConstraints gbc_tpInfo = new GridBagConstraints();
534 gbc_tpInfo.insets = new Insets(0, 0, 0, 5);
535 gbc_tpInfo.fill = GridBagConstraints.BOTH;
536 gbc_tpInfo.gridx = 0;
537 gbc_tpInfo.gridy = 0;
538 buttonPane.add(tpInfo, gbc_tpInfo);
539 }
540 }
541 JButton cancelButton = new JButton("Cancel");
542 cancelButton.addActionListener(new ActionListener() {
543 public void actionPerformed(ActionEvent e) {
544 omc.disconnect();
545 getTpInfo().setText(DISCONNECTED);
546 getTpInfo().setBackground(Color.ORANGE);
547 }
548 });
549 cancelButton.setActionCommand("Cancel");
550 GridBagConstraints gbc_cancelButton = new GridBagConstraints();
551 gbc_cancelButton.anchor = GridBagConstraints.NORTHWEST;
552 gbc_cancelButton.gridx = 2;
553 gbc_cancelButton.gridy = 0;
554 buttonPane.add(cancelButton, gbc_cancelButton);
555 }
556 }
557
558
559
560
561
562
563
564
565
566
567 @SuppressWarnings("serial")
568 private class ConnectAction extends AbstractAction {
569 public ConnectAction() {
570 putValue(NAME, "Connect");
571 putValue(SHORT_DESCRIPTION, "Connect to database and read datasets.");
572 }
573
574 public void actionPerformed(ActionEvent e) {
575 if (omc.connect()) {
576 getTpInfo().setText(CONNECTED);
577 getTpInfo().setBackground(Color.GREEN);
578 JList<String> lid = getListDatasetsDownload();
579 JList<String> liu = getListDatasetsUpload();
580 DefaultListModel<String> model = new DefaultListModel<String>();
581 for (DatasetData e1 : omc.getDatasets()) {
582 model.addElement(e1.getName() + " (" + e1.getId() + ")");
583 }
584 lid.setModel(model);
585 liu.setModel(model);
586
587 } else {
588 getTpInfo().setText(DISCONNECTED);
589 getTpInfo().setBackground(Color.ORANGE);
590 }
591 }
592 }
593
594
595
596
597
598
599
600
601
602 @SuppressWarnings("serial")
603 private class DownloadAction extends AbstractAction {
604 public DownloadAction() {
605 putValue(NAME, "Download");
606 putValue(SHORT_DESCRIPTION, "Download experiment");
607 }
608
609 public void actionPerformed(ActionEvent e) {
610 getTabbedPane().setSelectedComponent(getPanelDownload());
611 }
612 }
613
614
615
616
617
618
619
620
621
622 @SuppressWarnings("serial")
623 private class UploadAction extends AbstractAction {
624 public UploadAction() {
625 putValue(NAME, "Upload");
626 putValue(SHORT_DESCRIPTION, "Upload folder");
627 }
628
629 public void actionPerformed(ActionEvent e) {
630 getTabbedPane().setSelectedComponent(getPanelUpload());
631 }
632 }
633
634 protected JTabbedPane getTabbedPane() {
635 return tabbedPane;
636 }
637
638 protected JPanel getPanelDownload() {
639 return panelDownload;
640 }
641
642 protected JPanel getPanelUpload() {
643 return panelUpload;
644 }
645
646
647
648
649
650
651
652
653
654 @SuppressWarnings("serial")
655 private class StoreAction extends AbstractAction {
656
657 public StoreAction() {
658 putValue(NAME, "Store credentials");
659 putValue(SHORT_DESCRIPTION, "Store login details in ImageJ preference file");
660 }
661
662 public void actionPerformed(ActionEvent e) {
663 if (e.getSource() instanceof JCheckBox) {
664 JCheckBox obj = (JCheckBox) e.getSource();
665 LOGGER.debug("Store: " + obj.isSelected());
666 if (obj.isSelected()) {
667 omc.uploadPrefs(false);
668 } else {
669 omc.uploadPrefs(true);
670 }
671 }
672 }
673 }
674
675 protected JCheckBox getChckbxStoreCred() {
676 return chckbxStoreCred;
677 }
678
679 protected JTextPane getTpInfo() {
680 return tpInfo;
681 }
682
683 protected JPanel getPanelSetup() {
684 return panelSetup;
685 }
686
687 protected JList<String> getListDatasetsDownload() {
688 return listDatasetsDownload;
689 }
690
691 protected JTable getTableImagesDownload() {
692 return tableImagesDownload;
693 }
694
695 protected JList<String> getListDatasetsUpload() {
696 return listDatasetsUpload;
697 }
698
699 protected JTable getTableImagesUpload() {
700 return tableImagesUpload;
701 }
702
703
704
705
706
707
708
709 @SuppressWarnings("serial")
710 private class UploadExperimentAction extends AbstractAction {
711 public UploadExperimentAction() {
712 putValue(NAME, "Select experiment and upload");
713 putValue(SHORT_DESCRIPTION, "Upload QCONF to Omero");
714 }
715
716 public void actionPerformed(ActionEvent e) {
717 setPanelEnabled(getContentPane(), false);
718 omc.upload();
719 if (omc.getCurrentDatasets().validate()) {
720 imageTableModel.update(omc.getImages(omc.getCurrentDatasets().currentEl));
721 }
722 setPanelEnabled(getContentPane(), true);
723 }
724 }
725
726 private void setPanelEnabled(Container container, Boolean isEnabled) {
727 container.setEnabled(isEnabled);
728
729 Component[] components = container.getComponents();
730
731 for (Component component : components) {
732 if (component instanceof Container) {
733 setPanelEnabled((Container) component, isEnabled);
734 }
735 component.setEnabled(isEnabled);
736 }
737 }
738
739
740
741
742
743
744
745 @SuppressWarnings("serial")
746 private class DownloadExperimentAction extends AbstractAction {
747 public DownloadExperimentAction() {
748 putValue(NAME, "Select folder and download");
749 putValue(SHORT_DESCRIPTION, "Download selected dataset");
750 }
751
752 public void actionPerformed(ActionEvent e) {
753 String folder = new DirectoryChooser("Select destination folder").getDirectory();
754 if (folder != null && !folder.isEmpty()) {
755 setPanelEnabled(getContentPane(), false);
756 omc.download(folder);
757 setPanelEnabled(getContentPane(), true);
758 }
759 }
760 }
761
762 protected JPanel getContentPanel() {
763 return contentPanel;
764 }
765 }
766
767 class ImageTable extends AbstractTableModel {
768
769 public String[] columnNames = { "Image", "Creation time", "ID" };
770
771 List<String[]> rows;
772
773 public ImageTable() {
774 rows = new ArrayList<>();
775 }
776
777 @Override
778 public int getRowCount() {
779 return rows.size();
780 }
781
782
783
784
785
786
787 @Override
788 public String getColumnName(int column) {
789 return columnNames[column];
790 }
791
792 @Override
793 public int getColumnCount() {
794 return columnNames.length;
795 }
796
797 @Override
798 public Object getValueAt(int rowIndex, int columnIndex) {
799 return rows.get(rowIndex)[columnIndex];
800 }
801
802 public void update(List<ImageData> up) {
803 rows.clear();
804 for (ImageData im : up) {
805 rows.add(new String[] { im.getName(),
806 new SimpleDateFormat("yyyy-MM-dd-HH mm ss").format(im.getCreated()),
807 Long.toString(im.getId()) });
808 }
809 fireTableDataChanged();
810 }
811
812 }